My two cents...
Embudo is really low. Probably not worth the drive now at those flows. I would hold off on NM and wait for flows to come up. If they don't come up, don't bother.
If I were you, I would head over to the front range and look for bear creek, clear creek blackrock section and cache la poudre narrows. All are running now, and we are getting pounded with rain today. Hard to know exactly what that will do to the creeks as we are typically a snow melt runoff driven flow spot, but I suspect flows will be higher.
Durango is a tough place for a IV/V paddler. Animas is low and the creeks like vallecito are solid class V that are better with a guide to the problematic scouting.
BV is a fun place to be when the water is up, but its low now. I would skip BV until flows come up.
So... my take... head to the front range to take advantage of the rain. Get the goods that are in for sure right now. Keep an eye on flows and go further if the flows materialize.
Also, gore is a great run. Its at a pretty juicy level right now, but you can portage a couple of big drops and still have a good day in there.